I fought this longer than I want to admit and the big mistake I made early was treating it like regular green algae. Shock would knock it back, brushing made it disappear for a couple days, then boom, same corners and shady spots again. That’s because mustard algae isn’t really dying, it’s just laying low. Normal chlorine levels don’t scare it much, especially if circulation is weak.
What finally worked was stretching the process out instead of doing one big hit. I brushed those corners every single day for a full week, not just until it looked clean. I raised chlorine to the high end and actually kept it there, not overnight, but for several days straight. At the same time I aimed a return directly at the problem wall because that area barely moved water. Filter pressure stayed normal, but the water in those corners was basically stagnant before.
The long term fix wasn’t just chlorine though. I realized the algae kept having something to eat. My phosphates were high from runoff and lawn stuff, so even after killing it, it had fuel to come back. Using aquadoc phosphate remover was the turning point. Once the food source was gone, the mustard algae stopped rebounding. I also cleaned anything that touched the pool, brush, net, floats, even tossed swimsuits in the wash, because that stuff absolutely reseeds the pool.
Now I don’t keep chlorine cranked all the time. I just make sure circulation hits shady spots and nutrients stay low. Mustard algae is less about one big shock and more about making the pool uncomfortable for it long enough that it can’t regroup. Anyone else notice it always comes back in the exact same corners until circulation and nutrients are fixed?